| UID: | 001170153 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1uebA3 |
| Range: | B:1-63 |
| Ligands: | UNX |
| PDB: | 1yby |
| PDB Description: | Translation elongation factor P |
| UniProt: | A3DDQ3 |
| Species: | Ruminiclostridium thermocellum |
Structure of domain e1ybyB5
Domains in the same chain:
| e1ybyB5 | B:1-63 | SH3 | SH3 | SH3 |
| e1ybyB4 | B:64-127 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
| e1ybyB6 | B:128-185 | OB-fold | Nucleic acid-binding proteins | Nucleic acid-binding proteins |
Domains in the same PDB:
Structural contacts of domain e1ybyB5 of H-group "SH3":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ybyA2 | B:x,y,z->A:X,Y,Z | Nucleic acid-binding proteins | Interaction Interface Pymol |
| e1ybyB5 | B:x,y,z->B:-X+1/2,Y-1/2,-Z+1 | SH3 | Interaction Interface Pymol |
| e1ybyB5 | B:-X+1/2,Y-1/2,-Z+1->B:x,y,z | SH3 | Interaction Interface Pymol |
| e1ybyA3 | B:x,y,z->A:X-1/2,Y+1/2,Z | SH3 | Interaction Interface Pymol |
