| UID: | 000079545 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1riqA2 |
| Range: | B:1-236 |
| Ligands: | ATP MG |
| PDB: | 1yfr |
| PDB Description: | Alanyl-tRNA synthetase |
| UniProt: | O67323 |
| Hsap BLAST neighbor: | P49588 |
| Species: | Aquifex aeolicus |
Structure of domain e1yfrB2
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e1yfrB2 of H-group "Class II aaRS and biotin synthetases":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1yfrA1 | B:x,y,z->A:-X+3/2,-Y,Z-1/2 | Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | Interaction Interface Pymol |
| e1yfrA2 | B:x,y,z->A:-X+3/2,-Y,Z-1/2 | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e1yfrA2 | B:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e1yfrA1 | B:x,y,z->A:X-1/2,-Y-1/2,-Z | Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | Interaction Interface Pymol |
| e1yfrB2 | B:x,y,z->B:-X+1,Y-1/2,-Z-1/2 | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
| e1yfrB2 | B:-X+1,Y-1/2,-Z-1/2->B:x,y,z | Class II aaRS and biotin synthetases | Interaction Interface Pymol |
