Domain ID e1yixA1

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: TatD_DNase
UID: 000008933
Type: Manual and representative domain
Range: A:1-265
Ligands: ZN
PDB: 1yix
PDB Description: deoxyribonuclease ycfH
UniProt: P0AFQ7
Hsap BLAST neighbor: Q17R31
Species:

Structure of domain e1yixA1

Structural contacts of domain e1yixA1 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yixA1 A:x,y,z->A:-X+1,Y-1/2,-Z+3 TIM barrels Interaction Interface Pymol
e1yixA1 A:-X+1,Y-1/2,-Z+3->A:x,y,z TIM barrels Interaction Interface Pymol
e1yixB1 A:x,y,z->B:-X+1,Y-1/2,-Z+2 TIM barrels Interaction Interface Pymol
e1yixA1 A:x,y,z->A:X-1,Y,Z TIM barrels Interaction Interface Pymol
e1yixA1 A:X-1,Y,Z->A:x,y,z TIM barrels Interaction Interface Pymol
e1yixB1 A:X,Y,Z-1->B:x,y,z TIM barrels Interaction Interface Pymol
e1yixA1 A:x,y,z->A:-X,Y-1/2,-Z+3 TIM barrels Interaction Interface Pymol
e1yixA1 A:-X,Y-1/2,-Z+3->A:x,y,z TIM barrels Interaction Interface Pymol
e1yixB1 A:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol