Domain ID e1yjyA3

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  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: SHMT
UID: 001152721
Type: Automatic domain
Parent: e1kl1A2
Range: A:1-275
Ligands: PLP
PDB: 1yjy
PDB Description: SERINE HYDROXYMETHYLTRANSFERASE
UniProt: Q7SIB6
Hsap BLAST neighbor: P34897
Species: Geobacillus stearothermophilus

Structure of domain e1yjyA3

Structural contacts of domain e1yjyA3 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yjyA3 A:x,y,z->A:-X,-Y,Z PLP-dependent transferases Interaction Interface Pymol
e1yjyA2 A:x,y,z->A:-X,-Y,Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1yjyA3 A:-X,-Y,Z->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1yjyA2 A:-X,-Y,Z->A:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1yjyA2 A:X-1/2,-Y+1/2,-Z+1->A:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1yjyA3 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 PLP-dependent transferases Interaction Interface Pymol
e1yjyA2 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1yjyA3 A:-X+1/2,Y-1/2,-Z+1->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1yjyA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e1yjyA3 A:x,y,z->A:-X,-Y,Z-1 PLP-dependent transferases Interaction Interface Pymol
e1yjyA3 A:-X,-Y,Z-1->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e1yjyA2 A:x,y,z->A:-X+1/2,Y-1/2,-Z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol