| UID: | 000004397 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:2-130 |
| PDB: | 1ykh |
| PDB Description: | RNA polymerase II holoenzyme component SRB7 |
| UniProt: | P47822 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e1ykhB1
Domains in the same chain:
| e1ykhB1 | B:2-130 | Mediator hinge subcomplex-like | Mediator hinge subcomplex-like | RNA polymerase II holoenzyme component SRB7 (MED21) |
Domains in the same PDB:
Structural contacts of domain e1ykhB1 of H-group "Mediator hinge subcomplex-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1ykhA1 | B:x,y,z->A:X,Y,Z | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhB1 | B:x,y,z->B:X,-Y+1,-Z+1/2 | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhB1 | B:X,-Y+1,-Z+1/2->B:x,y,z | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhB1 | B:x,y,z->B:-Y+1,-X+1,-Z+3/4 | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhB1 | B:-Y+1,-X+1,-Z+3/4->B:x,y,z | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhA1 | B:x,y,z->A:-Y+1,-X+1,-Z+3/4 | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhA1 | B:x,y,z->A:X,-Y+1,-Z+1/2 | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhA1 | B:x,y,z->A:X,-Y,-Z+1/2 | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhB1 | B:x,y,z->B:X,-Y,-Z+1/2 | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhB1 | B:X,-Y,-Z+1/2->B:x,y,z | Mediator hinge subcomplex-like | Interaction Interface Pymol |
| e1ykhA1 | B:x,y,z->A:Y,X,-Z+1/4 | Mediator hinge subcomplex-like | Interaction Interface Pymol |
