ECOD: domain e1ykhB1

Domain ID e1ykhB1

A: alpha duplicates or obligate multimers
X: Mediator hinge subcomplex-like
H: Mediator hinge subcomplex-like
T: RNA polymerase II holoenzyme component SRB7 (MED21)
F: Med21

UID:	000004397
Type:	Manual and representative domain
Range:	B:2-130
PDB:	1ykh
PDB Description:	RNA polymerase II holoenzyme component SRB7
UniProt:	P47822
Species:	Saccharomyces cerevisiae

Domains in the same chain:

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e1ykhB1	B:2-130	Mediator hinge subcomplex-like	Mediator hinge subcomplex-like	RNA polymerase II holoenzyme component SRB7 (MED21)

Domains in the same PDB:

e1ykhA1	A:111-205	Mediator hinge subcomplex-like	Mediator hinge subcomplex-like	MED7 hinge region
e1ykhB1	B:2-130	Mediator hinge subcomplex-like	Mediator hinge subcomplex-like	RNA polymerase II holoenzyme component SRB7 (MED21)

Structural contacts of domain e1ykhB1 of H-group "Mediator hinge subcomplex-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ykhA1	B:x,y,z->A:X,Y,Z	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhB1	B:x,y,z->B:X,-Y+1,-Z+1/2	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhB1	B:X,-Y+1,-Z+1/2->B:x,y,z	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhB1	B:x,y,z->B:-Y+1,-X+1,-Z+3/4	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhB1	B:-Y+1,-X+1,-Z+3/4->B:x,y,z	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhA1	B:x,y,z->A:-Y+1,-X+1,-Z+3/4	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhA1	B:x,y,z->A:X,-Y+1,-Z+1/2	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhA1	B:x,y,z->A:X,-Y,-Z+1/2	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhB1	B:x,y,z->B:X,-Y,-Z+1/2	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhB1	B:X,-Y,-Z+1/2->B:x,y,z	Mediator hinge subcomplex-like	Interaction Interface Pymol
e1ykhA1	B:x,y,z->A:Y,X,-Z+1/4	Mediator hinge subcomplex-like	Interaction Interface Pymol