ECOD: domain e1ykwB2

Domain ID e1ykwB2

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: RuBisCO_large

UID:	000095434
Type:	Automatic domain
Parent:	e5rubA2
Range:	B:146-428
PDB:	1ykw
PDB Description:	RuBisCO-like protein
UniProt:	Q8KBL4
Species:	Chlorobaculum tepidum

Domains in the same chain:

Download Pymol

e1ykwB1	B:4-145	Alpha-beta plaits	RuBisCO, large subunit, small (N-terminal) domain	RuBisCO, large subunit, small (N-terminal) domain
e1ykwB2	B:146-428	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e1ykwA1	A:4-145	Alpha-beta plaits	RuBisCO, large subunit, small (N-terminal) domain	RuBisCO, large subunit, small (N-terminal) domain
e1ykwA2	A:146-428	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1ykwB1	B:4-145	Alpha-beta plaits	RuBisCO, large subunit, small (N-terminal) domain	RuBisCO, large subunit, small (N-terminal) domain
e1ykwB2	B:146-428	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e1ykwB2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ykwA1	B:x,y,z->A:X,Y,Z	RuBisCO, large subunit, small (N-terminal) domain	Interaction Interface Pymol
e1ykwA2	B:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol
e1ykwA2	B:x,y,z->A:X-1,Y,Z	TIM barrels	Interaction Interface Pymol
e1ykwB2	B:x,y,z->B:-X+1,Y-1/2,-Z+2	TIM barrels	Interaction Interface Pymol
e1ykwB2	B:-X+1,Y-1/2,-Z+2->B:x,y,z	TIM barrels	Interaction Interface Pymol
e1ykwB1	B:-X+1,Y-1/2,-Z+2->B:x,y,z	RuBisCO, large subunit, small (N-terminal) domain	Interaction Interface Pymol
e1ykwA2	B:-X+1,Y-1/2,-Z+2->A:x,y,z	TIM barrels	Interaction Interface Pymol