ECOD: domain e1ym5A3

Domain ID e1ym5A3

A: a+b complex topology
X: Diaminopimelate epimerase-like
H: Diaminopimelate epimerase-like
T: Diaminopimelate epimerase-like
F: PhzC-PhzF

UID:	001273592
Type:	Automatic domain
Parent:	e1qy9A1
Range:	A:2-127
PDB:	1ym5
PDB Description:	Hypothetical 32.6 kDa protein in DAP2-SLT2 intergenic region
UniProt:	P38765
Hsap BLAST neighbor:	P30039
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e1ym5A3	A:2-127	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like
e1ym5A4	A:128-295	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like

Domains in the same PDB:

e1ym5A3	A:2-127	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like
e1ym5A4	A:128-295	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like	Diaminopimelate epimerase-like

Structural contacts of domain e1ym5A3 of H-group "Diaminopimelate epimerase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ym5A4	A:x,y,z->A:Y,X,-Z	Diaminopimelate epimerase-like	Interaction Interface Pymol
e1ym5A3	A:x,y,z->A:Y,X,-Z	Diaminopimelate epimerase-like	Interaction Interface Pymol
e1ym5A3	A:Y,X,-Z->A:x,y,z	Diaminopimelate epimerase-like	Interaction Interface Pymol
e1ym5A4	A:Y,X,-Z->A:x,y,z	Diaminopimelate epimerase-like	Interaction Interface Pymol
e1ym5A4	A:-Y+1/2,X+1/2,Z-1/4->A:x,y,z	Diaminopimelate epimerase-like	Interaction Interface Pymol
e1ym5A4	A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/4	Diaminopimelate epimerase-like	Interaction Interface Pymol
e1ym5A4	A:x,y,z->A:-Y+1/2,X-1/2,Z-1/4	Diaminopimelate epimerase-like	Interaction Interface Pymol