ECOD: domain e1ymhB1

Domain ID e1ymhB1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: V-set

UID:	000283344
Type:	Automatic domain
Parent:	e1mjuH1
Range:	B:1-113
PDB:	1ymh
PDB Description:	FAB 16D9D6, HEAVY CHAIN
Hsap BLAST neighbor:	A0A0J9YVY3
Species:	Mus musculus

Domains in the same chain:

Download Pymol

e1ymhB1	B:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhB2	B:114-213	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e1ymhA1	A:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhA2	A:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhB1	B:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhB2	B:114-213	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhC1	C:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhC2	C:108-214	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhD1	D:1-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhD2	D:114-213	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e1ymhE1	E:818-882	beta-Grasp	Immunoglobulin-binding domains	Immunoglobulin-binding domains
e1ymhF1	F:818-882	beta-Grasp	Immunoglobulin-binding domains	Immunoglobulin-binding domains

Structural contacts of domain e1ymhB1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ymhA1	B:x,y,z->A:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1ymhD1	B:X,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1ymhE1	B:-X+1,Y-1/2,-Z+1/2->E:x,y,z	Immunoglobulin-binding domains	Interaction Interface Pymol
e1ymhC1	B:x,y,z->C:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e1ymhD1	B:X-1,Y,Z->D:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e1ymhF1	B:x,y,z->F:-X+1,Y-1/2,-Z+1/2	Immunoglobulin-binding domains	Interaction Interface Pymol
e1ymhE1	B:X,Y,Z->E:x,y,z	Immunoglobulin-binding domains	Interaction Interface Pymol