Domain ID e1ymmA1

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  • A: beta sandwiches
  • X: Immunoglobulin-like beta-sandwich
  • H: Immunoglobulin-related
  • T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
  • F: C1-set
UID: 000038784
Type: Automatic domain
Parent: e1k5nB1
Range: A:83-179
Ligands: NAG
PDB: 1ymm
PDB Description: HLA class II histocompatibility antigen, DR alpha chain
UniProt: P01903
Hsap BLAST neighbor: P01903
Species: Homo sapiens

Structure of domain e1ymmA1

Structural contacts of domain e1ymmA1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ymmB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ymmB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ymmA1 A:x,y,z->A:-X-1/2,Y,-Z-1/2 Immunoglobulin-related Interaction Interface Pymol
e1ymmA2 A:x,y,z->A:-X-1/2,Y,-Z-1/2 MHC antigen-recognition domain Interaction Interface Pymol
e1ymmA2 A:-X-1/2,Y,-Z-1/2->A:x,y,z MHC antigen-recognition domain Interaction Interface Pymol
e1ymmA1 A:-X-1/2,Y,-Z-1/2->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e1ymmA1 A:-X-1/2,Y,-Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol