Domain ID e1yo8A2

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  • A: few secondary structure elements
  • X: TSP type-3 repeat
  • H: TSP type-3 repeat
  • T: TSP type-3 repeat
  • F: TSP_3
UID: 001836406
Type: Automatic domain
Parent: e1ux6A2
Range: A:692-955
Ligands: CA NAG
PDB: 1yo8
PDB Description: THROMBOSPONDIN-2
UniProt: P35442
Hsap BLAST neighbor: P35442
Species: Homo sapiens

Structure of domain e1yo8A2

Structural contacts of domain e1yo8A2 of H-group "TSP type-3 repeat":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yo8A2 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/2 TSP type-3 repeat Interaction Interface Pymol
e1yo8A1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1/2 Concanavalin A-like Interaction Interface Pymol
e1yo8A1 A:X-1/2,-Y+1/2,-Z+1/2->A:x,y,z Concanavalin A-like Interaction Interface Pymol
e1yo8A2 A:X-1/2,-Y+1/2,-Z+1/2->A:x,y,z TSP type-3 repeat Interaction Interface Pymol
e1yo8A2 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1/2 TSP type-3 repeat Interaction Interface Pymol
e1yo8A2 A:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z TSP type-3 repeat Interaction Interface Pymol
e1yo8A2 A:-X+1/2,Y-1/2,-Z+1/2->A:x,y,z TSP type-3 repeat Interaction Interface Pymol