Domain ID e1ypqB1

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  • A: a+b complex topology
  • X: C-type lectin-like
  • H: C-type lectin-like
  • T: C-type lectin-like
  • F: Lectin_C
UID: 000081926
Type: Automatic domain
Parent: e1qo3C1
Range: B:140-270
Ligands: DIO
PDB: 1ypq
PDB Description: OXIDISED LOW DENSITY LIPOPROTEIN (LECTIN-LIKE) RECEPTOR 1
UniProt: P78380
Hsap BLAST neighbor: P78380
Species: Homo sapiens

Structure of domain e1ypqB1

Structural contacts of domain e1ypqB1 of H-group "C-type lectin-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1ypqA1 B:x,y,z->A:X,Y,Z C-type lectin-like Interaction Interface Pymol
e1ypqB1 B:x,y,z->B:-X+1/2,Y-1/2,-Z+1 C-type lectin-like Interaction Interface Pymol
e1ypqB1 B:-X+1/2,Y-1/2,-Z+1->B:x,y,z C-type lectin-like Interaction Interface Pymol
e1ypqB1 B:x,y,z->B:X-1/2,Y-1/2,Z C-type lectin-like Interaction Interface Pymol
e1ypqB1 B:X-1/2,Y-1/2,Z->B:x,y,z C-type lectin-like Interaction Interface Pymol
e1ypqA1 B:x,y,z->A:X-1/2,Y+1/2,Z C-type lectin-like Interaction Interface Pymol
e1ypqA1 B:X,Y-1,Z->A:x,y,z C-type lectin-like Interaction Interface Pymol
e1ypqB1 B:x,y,z->B:-X,Y,-Z+1 C-type lectin-like Interaction Interface Pymol
e1ypqB1 B:-X,Y,-Z+1->B:x,y,z C-type lectin-like Interaction Interface Pymol
e1ypqA1 B:X-1/2,Y-1/2,Z->A:x,y,z C-type lectin-like Interaction Interface Pymol
e1ypqA1 B:-X+1/2,Y-1/2,-Z->A:x,y,z C-type lectin-like Interaction Interface Pymol
e1ypqA1 B:x,y,z->A:-X,Y,-Z C-type lectin-like Interaction Interface Pymol