ECOD: domain e1yq5B1

Domain ID e1yq5B1

FASTA
Coordinates
Conservation
Pymol

A: beta sandwiches
X: jelly-roll
H: TNF-like
T: TNF-like
F: PRD1_P5_C

UID:	001003264
Type:	Automatic domain
Parent:	e1yq6C1
Range:	B:197-340
PDB:	1yq5
PDB Description:	MINOR CAPSID PROTEIN
UniProt:	P22536
Species:	Enterobacteria phage PRD1

Structural contacts of domain e1yq5B1 of H-group "TNF-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1yq5B1	B:x,y,z->B:-Z+1/2,-X,Y+1/2	TNF-like	Interaction Interface Pymol
e1yq5B1	B:-Z+1/2,-X,Y+1/2->B:x,y,z	TNF-like	Interaction Interface Pymol
e1yq5A1	B:x,y,z->A:-X,Y-1/2,-Z+1/2	TNF-like	Interaction Interface Pymol
e1yq5A1	B:x,y,z->A:X,Y,Z	TNF-like	Interaction Interface Pymol
e1yq5A1	B:x,y,z->A:Z,X,Y	TNF-like	Interaction Interface Pymol

e1yq5A1	A:197-340	jelly-roll	TNF-like	TNF-like
e1yq5B1	B:197-340	jelly-roll	TNF-like	TNF-like