Domain ID e1yqeA1

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Peptidyl-tRNA hydrolase-like
  • T: Peptidyl-tRNA hydrolase-like
  • F: tRNA_deacylase
UID: 000010201
Type: Manual and representative domain
Range: A:1-181
Ligands: POP
PDB: 1yqe
PDB Description: Hypothetical UPF0204 protein AF0625
UniProt: O29630
Species: Archaeoglobus fulgidus

Structure of domain e1yqeA1

Structural contacts of domain e1yqeA1 of H-group "Peptidyl-tRNA hydrolase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yqeA1 A:x,y,z->A:X-1,Y,Z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1yqeA2 A:x,y,z->A:X-1,Y,Z a/b domain in AF0625-like proteins Interaction Interface Pymol
e1yqeA1 A:X-1,Y,Z->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1yqeA1 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1yqeA1 A:-X,Y-1/2,-Z+1/2->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1yqeA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z a/b domain in AF0625-like proteins Interaction Interface Pymol
e1yqeA2 A:X-1/2,-Y+1/2,-Z->A:x,y,z a/b domain in AF0625-like proteins Interaction Interface Pymol
e1yqeA2 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z a/b domain in AF0625-like proteins Interaction Interface Pymol
e1yqeA1 A:x,y,z->A:-X+1,Y-1/2,-Z+1/2 Peptidyl-tRNA hydrolase-like Interaction Interface Pymol
e1yqeA1 A:-X+1,Y-1/2,-Z+1/2->A:x,y,z Peptidyl-tRNA hydrolase-like Interaction Interface Pymol