| UID: | 000048345 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1ngnA1 |
| Range: | A:136-325 |
| Ligands: | CA |
| PDB: | 1yqm |
| PDB Description: | N-glycosylase/DNA lyase |
| UniProt: | O15527 |
| Hsap BLAST neighbor: | O15527 |
| Species: | Homo sapiens |
Structure of domain e1yqmA1
Domains in the same chain:
| e1yqmA2 | A:12-135 | TBP-like | TATA-box binding protein-like | TATA-box binding protein-like |
| e1yqmA1 | A:136-325 | HhH/H2TH | SAM/DNA-glycosylase | DNA-glycosylase |
Domains in the same PDB:
| e1yqmA2 | A:12-135 | TBP-like | TATA-box binding protein-like | TATA-box binding protein-like |
| e1yqmA1 | A:136-325 | HhH/H2TH | SAM/DNA-glycosylase | DNA-glycosylase |
Structural contacts of domain e1yqmA1 of H-group "SAM/DNA-glycosylase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1yqmA1 | A:x,y,z->A:X-Y,X,Z-1/6 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1yqmA1 | A:X-Y,X,Z-1/6->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1yqmA2 | A:X-Y,X,Z-1/6->A:x,y,z | TATA-box binding protein-like | Interaction Interface Pymol |
| e1yqmA1 | A:x,y,z->A:-Y+1,-X+1,-Z+1/6 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1yqmA2 | A:x,y,z->A:-Y+1,-X+1,-Z+1/6 | TATA-box binding protein-like | Interaction Interface Pymol |
| e1yqmA1 | A:-Y+1,-X+1,-Z+1/6->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1yqmA2 | A:-Y+1,-X+1,-Z+1/6->A:x,y,z | TATA-box binding protein-like | Interaction Interface Pymol |
| e1yqmA1 | A:x,y,z->A:-X+Y,Y,-Z+1/2 | SAM/DNA-glycosylase | Interaction Interface Pymol |
| e1yqmA1 | A:-X+Y,Y,-Z+1/2->A:x,y,z | SAM/DNA-glycosylase | Interaction Interface Pymol |
