Domain ID e1yr9A1

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP_bind_1
UID: 000102118
Type: Automatic domain
Parent: e1yrbA1
Range: A:1-244
Ligands: GDP PO4
PDB: 1yr9
PDB Description: ATP(GTP)binding protein
UniProt: Q9UYR9
Hsap BLAST neighbor: Q9HCN4
Species: Pyrococcus abyssi

Structure of domain e1yr9A1

Structural contacts of domain e1yr9A1 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yr9A1 A:x,y,z->A:-X+1,-Y,Z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:-X+1,-Y,Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:x,y,z->A:-X+1/2,Y-1/2,-Z+1 P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:-X+1/2,Y-1/2,-Z+1->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:x,y,z->A:X-1/2,-Y+1/2,-Z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:X-1/2,-Y+1/2,-Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:x,y,z->A:-X,-Y,Z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:-X,-Y,Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:x,y,z->A:-X+1,-Y,Z-1 P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:-X+1,-Y,Z-1->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:x,y,z->A:X,Y,Z-1 P-loop domains-related Interaction Interface Pymol
e1yr9A1 A:X,Y,Z-1->A:x,y,z P-loop domains-related Interaction Interface Pymol