| UID: | 000102114 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1yrbA1 |
| Range: | B:1-244 |
| Ligands: | GDP MG |
| PDB: | 1yrb |
| PDB Description: | ATP(GTP)binding protein |
| UniProt: | Q9UYR9 |
| Hsap BLAST neighbor: | Q9HCN4 |
| Species: | Pyrococcus abyssi |
Structure of domain e1yrbB1
Domains in the same chain:
| e1yrbB1 | B:1-244 | P-loop domains-like | P-loop domains-related | P-loop containing nucleoside triphosphate hydrolases |
Domains in the same PDB:
Structural contacts of domain e1yrbB1 of H-group "P-loop domains-related":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1yrbA1 | B:x,y,z->A:X,Y,Z | P-loop domains-related | Interaction Interface Pymol |
| e1yrbB1 | B:x,y,z->B:-X+1,Y-1/2,-Z | P-loop domains-related | Interaction Interface Pymol |
| e1yrbB1 | B:-X+1,Y-1/2,-Z->B:x,y,z | P-loop domains-related | Interaction Interface Pymol |
| e1yrbA1 | B:x,y,z->A:-X,Y-1/2,-Z | P-loop domains-related | Interaction Interface Pymol |
| e1yrbA1 | B:x,y,z->A:X,Y,Z-1 | P-loop domains-related | Interaction Interface Pymol |
