ECOD: domain e1yt5B2

Domain ID e1yt5B2

A: a/b three-layered sandwiches
X: Flavodoxin-like
H: Class I glutamine amidotransferase-like
T: Phosphofructokinase N-terminal domain
F: NAD_kinase

UID:	000280591
Type:	Automatic domain
Parent:	e1u0tA2
Range:	B:1-97
Ligands:	SO4
PDB:	1yt5
PDB Description:	inorganic polyphosphate/ATP-NAD kinase
UniProt:	Q9X255
Species:	Thermotoga maritima

Domains in the same chain:

Download Pymol

e1yt5B2	B:1-97	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e1yt5B1	B:98-256	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like

Domains in the same PDB:

e1yt5A1	A:1-97	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e1yt5A2	A:98-256	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like
e1yt5B2	B:1-97	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e1yt5B1	B:98-256	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like
e1yt5C2	C:1-97	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e1yt5C1	C:98-256	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like
e1yt5D2	D:1-97	Flavodoxin-like	Class I glutamine amidotransferase-like	Phosphofructokinase N-terminal domain
e1yt5D1	D:98-256	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like	NAD kinase beta sandwich domain-like

Structural contacts of domain e1yt5B2 of H-group "Class I glutamine amidotransferase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1yt5A1	B:x,y,z->A:-X+1,-Y+1,Z	Class I glutamine amidotransferase-like	Interaction Interface Pymol
e1yt5A2	B:x,y,z->A:X-1/2,-Y+1/2,-Z+1	NAD kinase beta sandwich domain-like	Interaction Interface Pymol
e1yt5C2	B:x,y,z->C:X-1/2,-Y+1/2,-Z+1	Class I glutamine amidotransferase-like	Interaction Interface Pymol