ECOD: domain e1ytmB2

Domain ID e1ytmB2

A: a/b three-layered sandwiches
X: P-loop domains-like
H: PEP carboxykinase N-terminal domain
T: PEP carboxykinase N-terminal domain
F: PEPCK_ATP

UID:	000294325
Type:	Automatic domain
Parent:	e2olrA2
Range:	B:1002-1220
Ligands:	MN OXD
PDB:	1ytm
PDB Description:	phosphoenolpyruvate carboxykinase [ATP]
UniProt:	O09460
Species:	Anaerobiospirillum succiniciproducens

Domain
In chain context
In PDB context

Structure of domain e1ytmB2

Domains in the same chain:

Download Pymol

e1ytmB2	B:1002-1220	P-loop domains-like	PEP carboxykinase N-terminal domain	PEP carboxykinase N-terminal domain
e1ytmB1	B:1220-1518	P-loop domains-like	P-loop domains-related	PEP carboxykinase catalytic C-terminal domain

Domains in the same PDB:

e1ytmA1	A:2-220	P-loop domains-like	PEP carboxykinase N-terminal domain	PEP carboxykinase N-terminal domain
e1ytmA2	A:220-518	P-loop domains-like	P-loop domains-related	PEP carboxykinase catalytic C-terminal domain
e1ytmB2	B:1002-1220	P-loop domains-like	PEP carboxykinase N-terminal domain	PEP carboxykinase N-terminal domain
e1ytmB1	B:1220-1518	P-loop domains-like	P-loop domains-related	PEP carboxykinase catalytic C-terminal domain

Structural contacts of domain e1ytmB2 of H-group "PEP carboxykinase N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ytmB2	B:x,y,z->B:-X+1,-Y+1,Z	PEP carboxykinase N-terminal domain	Interaction Interface Pymol
e1ytmB2	B:-X+1,-Y+1,Z->B:x,y,z	PEP carboxykinase N-terminal domain	Interaction Interface Pymol
e1ytmA2	B:X,Y,Z-1->A:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1ytmB1	B:X,Y,Z-1->B:x,y,z	P-loop domains-related	Interaction Interface Pymol