Domain ID e1yvfA1

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  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RdRP_3
UID: 000281321
Type: Automatic domain
Parent: e1gx5A1
Range: A:358-563
Ligands: CL GOL PH7 PO4
PDB: 1yvf
PDB Description: HCV NS5B POLYMERASE
UniProt: O93077
Species: Hepatitis C virus

Structure of domain e1yvfA1

Structural contacts of domain e1yvfA1 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yvfA2 A:x,y,z->A:-X,-X+Y,-Z+2/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1yvfA1 A:x,y,z->A:-X,-X+Y,-Z+2/3 helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1yvfA1 A:-X,-X+Y,-Z+2/3->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1yvfA2 A:-X,-X+Y,-Z+2/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1yvfA2 A:-Y+1,X-Y+1,Z-1/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol