ECOD: domain e1yvuA2

Domain ID e1yvuA2

A: a/b three-layered sandwiches
X: Middle domain in Argonaute homologs
H: Middle domain in Argonaute homologs
T: Middle domain in Argonaute homologs
F: Unmapped domains

UID:	000010957
Type:	Manual and representative domain
Range:	A:315-490
PDB:	1yvu
PDB Description:	HYPOTHETICAL PROTEIN AQ_1447
UniProt:	O67434
Species:

Domains in the same chain:

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Domains in the same PDB:

Structural contacts of domain e1yvuA2 of H-group "Middle domain in Argonaute homologs":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1yvuA2	A:x,y,z->A:X-1/2,-Y+3/2,-Z	Middle domain in Argonaute homologs	Interaction Interface Pymol
e1yvuA4	A:X-1/2,-Y+3/2,-Z->A:x,y,z	SH3	Interaction Interface Pymol
e1yvuA3	A:X-1/2,-Y+3/2,-Z->A:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e1yvuA2	A:X-1/2,-Y+3/2,-Z->A:x,y,z	Middle domain in Argonaute homologs	Interaction Interface Pymol
e1yvuA3	A:X-1,Y,Z->A:x,y,z	Ribonuclease H-like	Interaction Interface Pymol
e1yvuA5	A:X-1,Y,Z->A:x,y,z	Argonaute, N-terminal domain	Interaction Interface Pymol
e1yvuA4	A:X-1,Y,Z->A:x,y,z	SH3	Interaction Interface Pymol
e1yvuA5	A:x,y,z->A:-X+3/2,-Y+1,Z-1/2	Argonaute, N-terminal domain	Interaction Interface Pymol
e1yvuA6	A:x,y,z->A:-X+2,Y-1/2,-Z+1/2	Argonaute, N-terminal domain	Interaction Interface Pymol

e1yvuA6	A:4-14,A:91-166,A:260-314	Alpha-beta plaits	Argonaute, N-terminal domain	Argonaute, N-terminal domain
e1yvuA5	A:15-90	Alpha-beta plaits	Argonaute, N-terminal domain	Argonaute, N-terminal domain
e1yvuA4	A:167-259	SH3	SH3	SH3
e1yvuA2	A:315-490	Middle domain in Argonaute homologs	Middle domain in Argonaute homologs	Middle domain in Argonaute homologs
e1yvuA3	A:491-706	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like