Domain ID e1yvxA1

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  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: RdRP_3
UID: 000280278
Type: Automatic domain
Parent: e1gx5A1
Range: A:358-548
Ligands: IPC SO4
PDB: 1yvx
PDB Description: RNA DEPENDENT RNA POLYMERASE
UniProt: P26660
Species: Hepatitis C virus

Structure of domain e1yvxA1

Structural contacts of domain e1yvxA1 of H-group "helical bundle domain in reverse transcriptase-like polymerases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yvxA1 A:x,y,z->A:X-1/2,-Y+1/2,-Z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1yvxA2 A:x,y,z->A:X-1/2,-Y+1/2,-Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1yvxA2 A:X-1/2,-Y+1/2,-Z->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1yvxA1 A:X-1/2,-Y+1/2,-Z->A:x,y,z helical bundle domain in reverse transcriptase-like polymerases Interaction Interface Pymol
e1yvxA2 A:x,y,z->A:X-1,Y,Z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol