ECOD: domain e1yyfD1

Domain ID e1yyfD1

A: a+b four layers
X: Ntn/PP2C
H: Ntn
T: Proteasome subunits
F: Proteasome

UID:	000087367
Type:	Automatic domain
Parent:	e1yarH1
Range:	D:7-181
PDB:	1yyf
PDB Description:	ATP-dependent protease hslV
UniProt:	P39070
Species:	Bacillus subtilis

Domain
In chain context
In PDB context

Structure of domain e1yyfD1

Domains in the same chain:

Download Pymol

e1yyfD1	D:7-181	Ntn/PP2C	Ntn	Proteasome subunits

Domains in the same PDB:

e1yyfA1	A:1-174,A:210-333	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1yyfA2	A:334-443	Histone-like	Histone-related	AAA+ ATPase lid domain
e1yyfB1	B:1-174,B:210-333	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1yyfB2	B:334-443	Histone-like	Histone-related	AAA+ ATPase lid domain
e1yyfC1	C:7-181	Ntn/PP2C	Ntn	Proteasome subunits
e1yyfD1	D:7-181	Ntn/PP2C	Ntn	Proteasome subunits

Structural contacts of domain e1yyfD1 of H-group "Ntn":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1yyfC1	D:x,y,z->C:X,Y,Z	Ntn	Interaction Interface Pymol
e1yyfC1	D:-Y+1,X-Y,Z->C:x,y,z	Ntn	Interaction Interface Pymol
e1yyfD1	D:x,y,z->D:Y+1/3,X-1/3,-Z+2/3	Ntn	Interaction Interface Pymol
e1yyfD1	D:Y+1/3,X-1/3,-Z+2/3->D:x,y,z	Ntn	Interaction Interface Pymol
e1yyfC1	D:x,y,z->C:Y+1/3,X-1/3,-Z+2/3	Ntn	Interaction Interface Pymol
e1yyfA1	D:x,y,z->A:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e1yyfA2	D:x,y,z->A:X,Y,Z	Histone-related	Interaction Interface Pymol