ECOD: domain e1z1gD8

Domain ID e1z1gD8

A: a+b two layers
X: DNA-binding domain
H: GCC-box binding domain-like
T: GCC-box binding domain-like
F: Arm-DNA-bind_1

UID:	001176189
Type:	Automatic domain
Parent:	e1z1bA4
Range:	D:10-61
PDB:	1z1g
PDB Description:	Integrase
UniProt:	P03700
Species:	Enterobacteria phage lambda

Domain
In chain context
In PDB context

Structure of domain e1z1gD8

Domains in the same chain:

Download Pymol

e1z1gD8	D:10-61	DNA-binding domain	GCC-box binding domain-like	GCC-box binding domain-like
e1z1gD6	D:62-176	lambda integrase-N-like	lambda integrase-N	lambda integrase-N
e1z1gD5	D:177-299	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gD7	D:300-356	HTH	HTH	DNA breaking-rejoining enzymes

Domains in the same PDB:

e1z1gA8	A:8-61	DNA-binding domain	GCC-box binding domain-like	GCC-box binding domain-like
e1z1gA6	A:62-176	lambda integrase-N-like	lambda integrase-N	lambda integrase-N
e1z1gA5	A:177-299	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gA7	A:300-356	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gB8	B:10-61	DNA-binding domain	GCC-box binding domain-like	GCC-box binding domain-like
e1z1gB6	B:62-176	lambda integrase-N-like	lambda integrase-N	lambda integrase-N
e1z1gB5	B:177-299	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gB7	B:300-356	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gC8	C:8-61	DNA-binding domain	GCC-box binding domain-like	GCC-box binding domain-like
e1z1gC6	C:62-176	lambda integrase-N-like	lambda integrase-N	lambda integrase-N
e1z1gC5	C:177-299	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gC7	C:300-356	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gD8	D:10-61	DNA-binding domain	GCC-box binding domain-like	GCC-box binding domain-like
e1z1gD6	D:62-176	lambda integrase-N-like	lambda integrase-N	lambda integrase-N
e1z1gD5	D:177-299	HTH	HTH	DNA breaking-rejoining enzymes
e1z1gD7	D:300-356	HTH	HTH	DNA breaking-rejoining enzymes

Structural contacts of domain e1z1gD8 of H-group "GCC-box binding domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1z1gC8	D:x,y,z->C:X,Y,Z	GCC-box binding domain-like	Interaction Interface Pymol
e1z1gA8	D:x,y,z->A:X,Y,Z	GCC-box binding domain-like	Interaction Interface Pymol
e1z1gA6	D:x,y,z->A:X,Y,Z	lambda integrase-N	Interaction Interface Pymol
e1z1gB8	D:x,y,z->B:X,Y,Z	GCC-box binding domain-like	Interaction Interface Pymol