| UID: | 000185882 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:87-137 |
| Ligands: | ZN |
| PDB: | 1zbd |
| PDB Description: | RABPHILIN-3A |
| UniProt: | P47709 |
| Hsap BLAST neighbor: | Q9Y2J0 |
| Species: | Rattus norvegicus |
Structure of domain e1zbdB3
Domains in the same chain:
| e1zbdB2 | B:44-86,B:138-167 | Long alpha-hairpin | Slp2a Rab-binding domain-like | Slp2a Rab-binding domain-like |
| e1zbdB3 | B:87-137 | RING/U-box-like | RING/U-box-like | FYVE/PHD zinc finger |
Domains in the same PDB:
Structural contacts of domain e1zbdB3 of H-group "RING/U-box-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1zbdA1 | B:x,y,z->A:-X+1,Y,-Z | P-loop domains-related | Interaction Interface Pymol |
| e1zbdB3 | B:x,y,z->B:-X+1,Y,-Z+1 | RING/U-box-like | Interaction Interface Pymol |
| e1zbdB3 | B:-X+1,Y,-Z+1->B:x,y,z | RING/U-box-like | Interaction Interface Pymol |
| e1zbdA1 | B:x,y,z->A:-X+1,Y,-Z+1 | P-loop domains-related | Interaction Interface Pymol |
| e1zbdA1 | B:X-1/2,Y+1/2,Z->A:x,y,z | P-loop domains-related | Interaction Interface Pymol |
