ECOD: domain e1zbtA5

Domain ID e1zbtA5

A: a+b two layers
X: dsRBD-like
H: Peptidyl-tRNA hydrolase domain-like
T: Peptidyl-tRNA hydrolase domain-like
F: RF-1

UID:	001164782
Type:	Automatic domain
Parent:	e1gqeA3
Range:	A:211-294
PDB:	1zbt
PDB Description:	Peptide chain release factor 1
UniProt:	Q8DU64
Hsap BLAST neighbor:	O75570
Species:	Streptococcus mutans

Domains in the same chain:

Download Pymol

e1zbtA6	A:-1-17,A:38-106	Release factor (Pfam 00472) N-terminal alpha helical domain	Release factor (Pfam 00472) N-terminal alpha helical domain	Release factor (Pfam 00472) N-terminal alpha helical domain
e1zbtA4	A:107-210	Alpha-beta plaits	Ferredoxin-like domain in release factor	Ferredoxin-like domain in release factor
e1zbtA5	A:211-294	dsRBD-like	Peptidyl-tRNA hydrolase domain-like	Peptidyl-tRNA hydrolase domain-like
e1zbtA2	A:298-358	dsRBD-like	Peptidyl-tRNA hydrolase domain-like	Peptidyl-tRNA hydrolase domain-like

Domains in the same PDB:

e1zbtA6	A:-1-17,A:38-106	Release factor (Pfam 00472) N-terminal alpha helical domain	Release factor (Pfam 00472) N-terminal alpha helical domain	Release factor (Pfam 00472) N-terminal alpha helical domain
e1zbtA4	A:107-210	Alpha-beta plaits	Ferredoxin-like domain in release factor	Ferredoxin-like domain in release factor
e1zbtA5	A:211-294	dsRBD-like	Peptidyl-tRNA hydrolase domain-like	Peptidyl-tRNA hydrolase domain-like
e1zbtA2	A:298-358	dsRBD-like	Peptidyl-tRNA hydrolase domain-like	Peptidyl-tRNA hydrolase domain-like

Structural contacts of domain e1zbtA5 of H-group "Peptidyl-tRNA hydrolase domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1zbtA4	A:x,y,z->A:-Y+3/2,X-1/2,Z-1/4	Ferredoxin-like domain in release factor	Interaction Interface Pymol
e1zbtA2	A:x,y,z->A:-Y+3/2,X-1/2,Z-1/4	Peptidyl-tRNA hydrolase domain-like	Interaction Interface Pymol
e1zbtA2	A:x,y,z->A:-X+3/2,Y-1/2,-Z+3/4	Peptidyl-tRNA hydrolase domain-like	Interaction Interface Pymol
e1zbtA4	A:-X+3/2,Y-1/2,-Z+3/4->A:x,y,z	Ferredoxin-like domain in release factor	Interaction Interface Pymol
e1zbtA6	A:x,y,z->A:-Y+3/2,X+1/2,Z-1/4	Release factor (Pfam 00472) N-terminal alpha helical domain	Interaction Interface Pymol