Domain ID e1zdnB1

Download files:
  • A: a+b two layers
  • X: UBC-like
  • H: UBC-like
  • T: UBC-like
  • F: UQ_con
UID: 000075007
Type: Automatic domain
Parent: e1jatB1
Range: B:10-156
Ligands: NA
PDB: 1zdn
PDB Description: UBIQUITIN-CONJUGATING ENZYME E2S
UniProt: Q16763
Hsap BLAST neighbor: Q16763
Species: Homo sapiens

Structure of domain e1zdnB1

Domains in the same chain:

e1zdnB1 B:10-156 UBC-like UBC-like UBC-like

Domains in the same PDB:

e1zdnA1 A:6-156 UBC-like UBC-like UBC-like
e1zdnB1 B:10-156 UBC-like UBC-like UBC-like

Structural contacts of domain e1zdnB1 of H-group "UBC-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1zdnA1 B:x,y,z->A:X,Y,Z UBC-like Interaction Interface Pymol
e1zdnA1 B:X,Y,Z-1->A:x,y,z UBC-like Interaction Interface Pymol
e1zdnA1 B:-X+2,-Y+1,Z-1/2->A:x,y,z UBC-like Interaction Interface Pymol
e1zdnB1 B:x,y,z->B:X-Y,X-1,Z+1/6 UBC-like Interaction Interface Pymol
e1zdnB1 B:X-Y,X-1,Z+1/6->B:x,y,z UBC-like Interaction Interface Pymol
e1zdnA1 B:-Y+1,X-Y,Z-2/3->A:x,y,z UBC-like Interaction Interface Pymol
e1zdnA1 B:X-Y,X-1,Z-5/6->A:x,y,z UBC-like Interaction Interface Pymol
e1zdnB1 B:x,y,z->B:-X+2,-Y+1,Z-1/2 UBC-like Interaction Interface Pymol
e1zdnB1 B:-X+2,-Y+1,Z-1/2->B:x,y,z UBC-like Interaction Interface Pymol