Domain ID e1zm2A5

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 000101613
Type: Automatic domain
Parent: e2c78A3
Range: A:3-343
PDB: 1zm2
PDB Description: ELONGATION FACTOR 2
UniProt: P32324
Hsap BLAST neighbor: P13639
Species: Saccharomyces cerevisiae

Structure of domain e1zm2A5

Domains in the same chain:

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e1zm2A5 A:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm2A1 A:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm2A2 A:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm2A4 A:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm2A3 A:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e1zm2A5 A:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm2A1 A:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm2A2 A:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm2A4 A:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm2A3 A:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm2B1 B:399-602 ADP-ribosylation ADP-ribosylation ADP-ribosylation
e1zm2C5 C:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm2C1 C:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm2C2 C:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm2C4 C:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm2C3 C:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm2D1 D:399-602 ADP-ribosylation ADP-ribosylation ADP-ribosylation
e1zm2E5 E:3-343 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1zm2E1 E:344-481 cradle loop barrel RIFT-related Alanine racemase-C
e1zm2E2 E:482-560 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm2E4 E:561-725 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1zm2E3 E:726-842 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e1zm2F1 F:399-602 ADP-ribosylation ADP-ribosylation ADP-ribosylation

Structural contacts of domain e1zm2A5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1zm2C5 A:-X,Y,-Z->C:x,y,z P-loop domains-related Interaction Interface Pymol
e1zm2A5 A:x,y,z->A:-X,Y,-Z P-loop domains-related Interaction Interface Pymol
e1zm2A5 A:-X,Y,-Z->A:x,y,z P-loop domains-related Interaction Interface Pymol
e1zm2A3 A:X,Y-1,Z->A:x,y,z EF-G C-terminal domain-like Interaction Interface Pymol
e1zm2C5 A:X,Y,Z->C:x,y,z P-loop domains-related Interaction Interface Pymol