ECOD: domain e1zm3E4

Domain ID e1zm3E4

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: EFG_IV

UID:	000071136
Type:	Automatic domain
Parent:	e2dy1A4
Range:	E:561-725
PDB:	1zm3
PDB Description:	ELONGATION FACTOR 2
UniProt:	P32324
Hsap BLAST neighbor:	P13639
Species:	Saccharomyces cerevisiae

Domain
In chain context
In PDB context

Structure of domain e1zm3E4

Domains in the same chain:

Download Pymol

Domains in the same PDB:

e1zm3A5	A:3-343	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1zm3A1	A:344-481	cradle loop barrel	RIFT-related	Alanine racemase-C
e1zm3A2	A:482-560	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1zm3A4	A:561-725	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1zm3A3	A:726-842	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1zm3B1	B:399-602	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation
e1zm3C5	C:3-343	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1zm3C1	C:344-481	cradle loop barrel	RIFT-related	Alanine racemase-C
e1zm3C2	C:482-560	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1zm3C4	C:561-725	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1zm3C3	C:726-842	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1zm3D1	D:399-602	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation
e1zm3E5	E:3-343	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1zm3E1	E:344-481	cradle loop barrel	RIFT-related	Alanine racemase-C
e1zm3E2	E:482-560	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1zm3E4	E:561-725	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1zm3E3	E:726-842	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e1zm3F1	F:399-602	ADP-ribosylation	ADP-ribosylation	ADP-ribosylation

Structural contacts of domain e1zm3E4 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1zm3F1	E:X,Y,Z->F:x,y,z	ADP-ribosylation	Interaction Interface Pymol
e1zm3B1	E:x,y,z->B:-X,Y-1,-Z+1	ADP-ribosylation	Interaction Interface Pymol
e1zm3D1	E:x,y,z->D:X-1/2,Y-3/2,Z	ADP-ribosylation	Interaction Interface Pymol
e1zm3C4	E:x,y,z->C:-X,Y-1,-Z+1	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol