Domain ID e1zpkB1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: acid protease
  • F: RVP
UID: 000020187
Type: Automatic domain
Range: B:101-199
Ligands: 0ZS CL NA
PDB: 1zpk
PDB Description: PROTEASE RETROPEPSIN
UniProt: P03367
Species: Human immunodeficiency virus 1

Structure of domain e1zpkB1

Structural contacts of domain e1zpkB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1zpkA1 B:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e1zpkA1 B:X-Y+1,X+1,Z+1/6->A:x,y,z RIFT-related Interaction Interface Pymol
e1zpkB1 B:x,y,z->B:-Y,X-Y+1,Z+1/3 RIFT-related Interaction Interface Pymol
e1zpkB1 B:-Y,X-Y+1,Z+1/3->B:x,y,z RIFT-related Interaction Interface Pymol
e1zpkA1 B:x,y,z->A:-X,-Y+1,Z-1/2 RIFT-related Interaction Interface Pymol
e1zpkA1 B:X-Y,X,Z+1/6->A:x,y,z RIFT-related Interaction Interface Pymol
e1zpkB1 B:x,y,z->B:X-Y,X,Z+1/6 RIFT-related Interaction Interface Pymol
e1zpkB1 B:X-Y,X,Z+1/6->B:x,y,z RIFT-related Interaction Interface Pymol
e1zpkA1 B:x,y,z->A:X-Y,X,Z+1/6 RIFT-related Interaction Interface Pymol