Domain ID e1zrtE1

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  • A: few secondary structure elements
  • X: Trm112p-like
  • H: Trm112p-like
  • T: Trm112p-like
  • F: Rieske
UID: 001608255
Type: Automatic domain
Parent: e1rieA2
Range: E:105-191
Ligands: FES SMA
PDB: 1zrt
PDB Description: Ubiquinol-cytochrome c reductase iron-sulfur subunit
UniProt: P0CY48
Hsap BLAST neighbor: P47985
Species: Rhodobacter capsulatus

Structure of domain e1zrtE1

Domains in the same chain:

e1zrtE3 E:11-42 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1zrtE2 E:43-104 ISP domain ISP domain ISP domain
e1zrtE1 E:105-191 Trm112p-like Trm112p-like Trm112p-like

Domains in the same PDB:

e1zrtC2 C:2-284 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e1zrtC1 C:283-428 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1zrtD1 D:2-258 Cytochrome c-like Cytochrome c Cytochrome c
e1zrtE3 E:11-42 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1zrtE2 E:43-104 ISP domain ISP domain ISP domain
e1zrtE1 E:105-191 Trm112p-like Trm112p-like Trm112p-like
e1zrtP2 P:2-284 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e1zrtP1 P:283-428 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1zrtQ1 Q:2-258 Cytochrome c-like Cytochrome c Cytochrome c
e1zrtR3 R:11-42 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1zrtR2 R:43-104 ISP domain ISP domain ISP domain
e1zrtR1 R:105-191 Trm112p-like Trm112p-like Trm112p-like

Structural contacts of domain e1zrtE1 of H-group "Trm112p-like":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1zrtC2 E:x,y,z->C:X-1,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e1zrtQ1 E:x,y,z->Q:X,Y,Z Cytochrome c Interaction Interface Pymol