Domain ID e2ag0D1

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 000293914
Type: Automatic domain
Parent: e2ez9A1
Range: D:186-367
PDB: 2ag0
PDB Description: benzaldehyde lyase
UniProt: Q9F4L3
Species: Pseudomonas fluorescens

Structure of domain e2ag0D1

Domains in the same chain:

Download Pymol

e2ag0D3 D:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0D1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag0D2 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e2ag0A3 A:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0A1 A:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag0A2 A:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0B3 B:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0B1 B:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag0B2 B:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0C3 C:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0C1 C:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag0C2 C:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0D3 D:2-185 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e2ag0D1 D:186-367 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e2ag0D2 D:368-555 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e2ag0D1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ag0C3 D:x,y,z->C:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag0A3 D:x,y,z->A:X,Y,Z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag0A1 D:x,y,z->A:X,Y,Z Rossmann-related Interaction Interface Pymol
e2ag0D2 D:x,y,z->D:X-Y,-Y,-Z+2/3 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag0D2 D:X-Y,-Y,-Z+2/3->D:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e2ag0C2 D:x,y,z->C:-X+1,-X+Y,-Z+1/3 Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol