Domain ID e2axtD1

Download files:
  • A: alpha bundles
  • X: Bacterial photosystem II reaction centre L and M subunits-like
  • H: Bacterial photosystem II reaction centre L and M subunits-like
  • T: Bacterial photosystem II reaction centre L and M subunits-like
  • F: Photo_RC
UID: 000004212
Type: Manual and representative domain
Range: D:13-352
Ligands: BCR BCT CLA DGD FE2 LHG LMT MGE PHO PQ9 SQD UNK
PDB: 2axt
PDB Description: photosystem II reaction center D2 protein
UniProt: Q8CM25
Species:

Structure of domain e2axtD1

Domains in the same chain:

Download Pymol

e2axtD1 D:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like

Domains in the same PDB:

e2axta1 a:5010-5344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e2axtA1 A:10-344 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e2axtb1 b:5002-5328,b:5445-5489 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e2axtb2 b:5329-5444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e2axtB2 B:2-328,B:445-489 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e2axtB3 B:329-444 Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain Photosystem II antenna protein PsbB insertion domain
e2axtc1 c:5027-5473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e2axtC1 C:27-473 Photosystem II antenna protein-like Photosystem II antenna protein-like Photosystem II antenna protein-like
e2axtd1 d:5013-5352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e2axtD1 D:13-352 Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like Bacterial photosystem II reaction centre L and M subunits-like
e2axte1 e:5003-5084 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e2axtE1 E:3-84 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e2axtf1 f:5011-5045 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e2axtF1 F:11-45 Cytochrome b559 subunits Cytochrome b559 subunits Cytochrome b559 subunits
e2axth1 h:5002-5065 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e2axtH1 H:2-65 Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH Photosystem II 10 kDa phosphoprotein PsbH
e2axti1 i:5001-5035 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e2axtI1 I:1-35 Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI Photosystem II reaction center protein I, PsbI
e2axtj1 j:5007-5040 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e2axtJ1 J:7-40 Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ Photosystem II reaction center protein J, PsbJ
e2axtk1 k:5010-5046 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e2axtK1 K:10-46 Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK Photosystem II reaction center protein K, PsbK
e2axtl1 l:5001-5037 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e2axtL1 L:1-37 Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL Photosystem II reaction center protein L, PsbL
e2axtm1 m:5001-5036 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e2axtM1 M:1-36 Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM Photosystem II reaction center protein M, PsbM
e2axto1 o:5030-5271 Outer membrane meander beta-barrels OMPA-like OMPA-like
e2axtO1 O:30-271 Outer membrane meander beta-barrels OMPA-like OMPA-like
e2axtt1 t:5001-5030 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e2axtT1 T:1-30 Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT Photosystem II reaction center protein T, PsbT
e2axtu1 u:5037-5134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2axtU1 U:37-134 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e2axtv1 v:5027-5163 Cytochrome c-like Cytochrome c Cytochrome c
e2axtV1 V:27-157 Cytochrome c-like Cytochrome c Cytochrome c
e2axtz1 z:5001-5062 PsbZ-like PsbZ-like PsbZ-like
e2axtZ1 Z:1-62 PsbZ-like PsbZ-like PsbZ-like

Structural contacts of domain e2axtD1 of H-group "Bacterial photosystem II reaction centre L and M subunits-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2axtA1 D:x,y,z->A:X,Y,Z Bacterial photosystem II reaction centre L and M subunits-like Interaction Interface Pymol
e2axtB3 D:x,y,z->B:X,Y,Z Photosystem II antenna protein PsbB insertion domain Interaction Interface Pymol
e2axtB2 D:x,y,z->B:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e2axtC1 D:x,y,z->C:X,Y,Z Photosystem II antenna protein-like Interaction Interface Pymol
e2axtE1 D:X,Y,Z->E:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e2axtO1 D:X,Y,Z->O:x,y,z OMPA-like Interaction Interface Pymol
e2axtF1 D:X,Y,Z->F:x,y,z Cytochrome b559 subunits Interaction Interface Pymol
e2axtL1 D:X,Y,Z->L:x,y,z Photosystem II reaction center protein L, PsbL Interaction Interface Pymol
e2axtH1 D:X,Y,Z->H:x,y,z Photosystem II 10 kDa phosphoprotein PsbH Interaction Interface Pymol
e2axtT1 D:X,Y,Z->T:x,y,z Photosystem II reaction center protein T, PsbT Interaction Interface Pymol
e2axtM1 D:X,Y,Z->M:x,y,z Photosystem II reaction center protein M, PsbM Interaction Interface Pymol
e2axtU1 D:X,Y,Z->U:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e2axtJ1 D:X,Y,Z->J:x,y,z Photosystem II reaction center protein J, PsbJ Interaction Interface Pymol