Domain ID e2ayiD2

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  • A: a/b three-layered sandwiches
  • X: Middle domain in Argonaute homologs
  • H: Middle domain in Argonaute homologs
  • T: Middle domain in Argonaute homologs
  • F: Peptidase_M29
UID: 000113881
Type: Automatic domain
Parent: e2ayiA2
Range: D:3-176
PDB: 2ayi
PDB Description: Aminopeptidase T
UniProt: P42778
Species: Thermus thermophilus

Structure of domain e2ayiD2

Domains in the same chain:

e2ayiD2 D:3-176 Middle domain in Argonaute homologs Middle domain in Argonaute homologs Middle domain in Argonaute homologs
e2ayiD1 D:177,D:184-407 Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29)

Domains in the same PDB:

e2ayiA2 A:3-177 Middle domain in Argonaute homologs Middle domain in Argonaute homologs Middle domain in Argonaute homologs
e2ayiA1 A:184-408 Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29)
e2ayiB2 B:3-176 Middle domain in Argonaute homologs Middle domain in Argonaute homologs Middle domain in Argonaute homologs
e2ayiB1 B:177,B:184-407 Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29)
e2ayiC2 C:3-176 Middle domain in Argonaute homologs Middle domain in Argonaute homologs Middle domain in Argonaute homologs
e2ayiC1 C:177,C:184-407 Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29)
e2ayiD2 D:3-176 Middle domain in Argonaute homologs Middle domain in Argonaute homologs Middle domain in Argonaute homologs
e2ayiD1 D:177,D:184-407 Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29)
e2ayiE2 E:3-176 Middle domain in Argonaute homologs Middle domain in Argonaute homologs Middle domain in Argonaute homologs
e2ayiE1 E:177,E:184-407 Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29) Barrel domain in thermophilic metalloproteases (M29)

Structural contacts of domain e2ayiD2 of H-group "Middle domain in Argonaute homologs":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ayiE2 D:X,Y,Z->E:x,y,z Middle domain in Argonaute homologs Interaction Interface Pymol
e2ayiD2 D:x,y,z->D:X,Y,Z-1 Middle domain in Argonaute homologs Interaction Interface Pymol
e2ayiD2 D:X,Y,Z-1->D:x,y,z Middle domain in Argonaute homologs Interaction Interface Pymol