ECOD: domain e2bc4D1

Domain ID e2bc4D1

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like
F: C1-set

UID:	000299939
Type:	Automatic domain
Parent:	e1k5nB1
Range:	D:92-199
Ligands:	CL
PDB:	2bc4
PDB Description:	HLA class II histocompatibility antigen, DM beta chain
UniProt:	P28068
Hsap BLAST neighbor:	P28068
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e2bc4D2	D:3-93	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e2bc4D1	D:92-199	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Domains in the same PDB:

e2bc4A2	A:13-99	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e2bc4A1	A:100-200	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2bc4B2	B:3-93	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e2bc4B1	B:92-193	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2bc4C2	C:12-99	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e2bc4C1	C:100-206	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e2bc4D2	D:3-93	MHC antigen-recognition domain	MHC antigen-recognition domain	MHC antigen-recognition domain
e2bc4D1	D:92-199	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like

Structural contacts of domain e2bc4D1 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2bc4C2	D:x,y,z->C:X,Y,Z	MHC antigen-recognition domain	Interaction Interface Pymol
e2bc4C1	D:x,y,z->C:X,Y,Z	Immunoglobulin-related	Interaction Interface Pymol
e2bc4A1	D:-X+1,Y-1/2,-Z+1/2->A:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2bc4A2	D:-X+1,Y-1/2,-Z+1/2->A:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e2bc4A2	D:-X+1,Y-1/2,-Z+1/2->D:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e2bc4A2	D:X,Y-1,Z->A:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e2bc4A2	D:X,Y-1,Z->B:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol
e2bc4C2	D:-X+1,Y-1/2,-Z+1/2->C:x,y,z	MHC antigen-recognition domain	Interaction Interface Pymol