Domain ID e2bfgF2

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Glyco_hydro_39
UID: 000094886
Type: Automatic domain
Parent: e1uhvA2
Range: F:14-360
Ligands: NA SO4 XYS
PDB: 2bfg
PDB Description: BETA-XYLOSIDASE
UniProt: Q9ZFM2
Hsap BLAST neighbor: P35475
Species: Geobacillus stearothermophilus

Structure of domain e2bfgF2

Domains in the same chain:

e2bfgF1 F:4-13,F:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgF2 F:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels

Domains in the same PDB:

e2bfgA1 A:4-13,A:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgA2 A:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e2bfgB1 B:4-13,B:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgB2 B:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e2bfgC1 C:4-13,C:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgC2 C:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e2bfgD1 D:4-13,D:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgD2 D:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e2bfgE1 E:4-13,E:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgE2 E:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e2bfgF1 F:4-13,F:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgF2 F:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e2bfgG1 G:4-13,G:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgG2 G:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels
e2bfgH1 H:4-13,H:361-502 Glycosyl hydrolase domain-like Glycosyl hydrolase domain Glycosyl hydrolase domain
e2bfgH2 H:14-360 TIM beta/alpha-barrel TIM barrels TIM barrels

Structural contacts of domain e2bfgF2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2bfgH1 F:X,Y,Z->H:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol
e2bfgG2 F:X,Y,Z->G:x,y,z TIM barrels Interaction Interface Pymol
e2bfgG1 F:X,Y,Z->G:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol
e2bfgB2 F:-X,Y-1/2,-Z+1/2->B:x,y,z TIM barrels Interaction Interface Pymol
e2bfgE1 F:x,y,z->E:X,Y,Z Glycosyl hydrolase domain Interaction Interface Pymol
e2bfgD2 F:x,y,z->D:X,Y,Z TIM barrels Interaction Interface Pymol
e2bfgA1 F:-X,Y-1/2,-Z+1/2->A:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol