Domain ID e2bm1A5

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 000101596
Type: Automatic domain
Parent: e2c78A3
Range: A:7-39,A:65-282
Ligands: GDP MG
PDB: 2bm1
PDB Description: ELONGATION FACTOR G
UniProt: P13551
Hsap BLAST neighbor: Q96RP9
Species: Thermus thermophilus

Structure of domain e2bm1A5

Structural contacts of domain e2bm1A5 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2bm1A1 A:x,y,z->A:-X,Y-1/2,-Z+1/2 RIFT-related Interaction Interface Pymol
e2bm1A4 A:x,y,z->A:-X,Y-1/2,-Z+1/2 Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2bm1A3 A:X-1,Y,Z->A:x,y,z EF-G C-terminal domain-like Interaction Interface Pymol
e2bm1A4 A:X-1,Y,Z->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2bm1A4 A:x,y,z->A:-X-1/2,-Y-1,Z-1/2 Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e2bm1A1 A:x,y,z->A:-X+1/2,-Y-1,Z-1/2 RIFT-related Interaction Interface Pymol