Domain ID e2bpfA3

Download files:
  • A: a+b three layers
  • X: Nucleotidyltransferase-like
  • H: Nucleotidyltransferase
  • T: Nucleotidyltransferase
  • F: DNA_pol_B_thumb,DNA_pol_B_palm
UID: 000078118
Type: Automatic domain
Parent: e2fmpA3
Range: A:149-335
Ligands: DCT MG
PDB: 2bpf
PDB Description: PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
UniProt: P06766
Hsap BLAST neighbor: P06746
Species: Rattus norvegicus

Structure of domain e2bpfA3

Structural contacts of domain e2bpfA3 of H-group "Nucleotidyltransferase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2bpfA3 A:x,y,z->A:X-Y+1,X,Z+1/6 Nucleotidyltransferase Interaction Interface Pymol
e2bpfA3 A:X-Y+1,X,Z+1/6->A:x,y,z Nucleotidyltransferase Interaction Interface Pymol
e2bpfA1 A:X-Y+1,X,Z+1/6->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e2bpfA2 A:X-Y+1,X,Z+1/6->A:x,y,z SAM/DNA-glycosylase Interaction Interface Pymol
e2bpfA1 A:x,y,z->A:-Y+1,X-Y+1,Z+1/3 SAM/DNA-glycosylase Interaction Interface Pymol