ECOD: domain e2byvE4

Domain ID e2byvE4

A: alpha arrays
X: HTH
H: HTH
T: winged
F: DEP

UID:	001390794
Type:	Automatic domain
Parent:	e1fshA1
Range:	E:170-317
PDB:	2byv
PDB Description:	RAP GUANINE NUCLEOTIDE EXCHANGE FACTOR 4
UniProt:	Q9EQZ6
Hsap BLAST neighbor:	Q8WZA2
Species:	Mus musculus

Domain
In chain context
In PDB context

Structure of domain e2byvE4

Domains in the same chain:

Download Pymol

e2byvE3	E:15-169	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2byvE4	E:170-317	HTH	HTH	winged
e2byvE5	E:318-445	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2byvE2	E:443-613	Repetitive alpha hairpins	Ras GEF	Ras GEF
e2byvE6	E:642-727	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2byvE1	E:728-991	Repetitive alpha hairpins	Ras GEF	Ras GEF

Domains in the same PDB:

e2byvE3	E:15-169	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2byvE4	E:170-317	HTH	HTH	winged
e2byvE5	E:318-445	jelly-roll	Double-stranded beta-helix	Double-stranded beta-helix
e2byvE2	E:443-613	Repetitive alpha hairpins	Ras GEF	Ras GEF
e2byvE6	E:642-727	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e2byvE1	E:728-991	Repetitive alpha hairpins	Ras GEF	Ras GEF

Structural contacts of domain e2byvE4 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2byvE5	E:x,y,z->E:-X+1,Y-1/2,-Z+1/2	Double-stranded beta-helix	Interaction Interface Pymol
e2byvE4	E:x,y,z->E:-X+1,Y-1/2,-Z+1/2	HTH	Interaction Interface Pymol
e2byvE3	E:x,y,z->E:-X+1,Y-1/2,-Z+1/2	Double-stranded beta-helix	Interaction Interface Pymol
e2byvE4	E:-X+1,Y-1/2,-Z+1/2->E:x,y,z	HTH	Interaction Interface Pymol
e2byvE1	E:-X+1,Y-1/2,-Z+1/2->E:x,y,z	Ras GEF	Interaction Interface Pymol
e2byvE2	E:-X+1,Y-1/2,-Z+1/2->E:x,y,z	Ras GEF	Interaction Interface Pymol