| UID: | 000189443 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1byrA1 |
| Range: | A:1-194 |
| Ligands: | BCT GOL MES SRT TLA TRS |
| PDB: | 2c1l |
| PDB Description: | RESTRICTION ENDONUCLEASE |
| UniProt: | Q9F4C9 |
| Species: | Bacillus firmus |
Structure of domain e2c1lA1
Domains in the same chain:
| e2c1lA1 | A:1-194 | Phospholipase D/nuclease | Phospholipase D/nuclease | Phospholipase D/nuclease |
| e2c1lA2 | A:195-358 | cradle loop barrel | RIFT-related | Type II restriction endonuclease effector domain |
Domains in the same PDB:
Structural contacts of domain e2c1lA1 of H-group "Phospholipase D/nuclease":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2c1lB1 | A:X,Y,Z->B:x,y,z | RIFT-related | Interaction Interface Pymol |
| e2c1lB2 | A:X,Y,Z->B:x,y,z | Phospholipase D/nuclease | Interaction Interface Pymol |
| e2c1lA2 | A:-Y,X,Z->A:x,y,z | RIFT-related | Interaction Interface Pymol |
| e2c1lB2 | A:-X+1/2,-Y+1/2,Z-1/2->B:x,y,z | Phospholipase D/nuclease | Interaction Interface Pymol |
| e2c1lB1 | A:x,y,z->B:-Y+1/2,X-1/2,Z+1/2 | RIFT-related | Interaction Interface Pymol |
| e2c1lA2 | A:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z | RIFT-related | Interaction Interface Pymol |
