ECOD: domain e2c35A1

Domain ID e2c35A1

A: alpha arrays
X: HhH/H2TH
H: SAM/DNA-glycosylase
T: SAM domain-like
F: RNA_pol_Rpb4

UID:	000002979
Type:	Manual and representative domain
Range:	A:14-142
PDB:	2c35
PDB Description:	DNA-DIRECTED RNA POLYMERASE II 16 KDA POLYPEPTIDE
UniProt:	O15514
Hsap BLAST neighbor:	O15514
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e2c35A1	A:14-142	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e2c35A1	A:14-142	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2c35B2	B:1-77	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e2c35B1	B:79-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2c35C1	C:14-142	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2c35D2	D:1-77	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e2c35D1	D:79-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2c35E1	E:14-139	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2c35F2	F:1-77	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e2c35F1	F:79-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e2c35G1	G:14-139	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e2c35H2	H:1-77	Dodecin subunit-like	Flavin-binding protein dodecin-like	Flavin-binding protein dodecin-like
e2c35H1	H:79-171	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Structural contacts of domain e2c35A1 of H-group "SAM/DNA-glycosylase":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2c35B2	A:X,Y,Z->B:x,y,z	Flavin-binding protein dodecin-like	Interaction Interface Pymol
e2c35B1	A:X,Y,Z->B:x,y,z	Nucleic acid-binding proteins	Interaction Interface Pymol
e2c35D2	A:X,Y,Z->D:x,y,z	Flavin-binding protein dodecin-like	Interaction Interface Pymol