ECOD: domain e2c38M2

Domain ID e2c38M2

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: RNase_PH

UID:	000071344
Type:	Automatic domain
Parent:	e2nn6A2
Range:	M:1-191
Ligands:	AMP
PDB:	2c38
PDB Description:	PROBABLE EXOSOME COMPLEX EXONUCLEASE 2
UniProt:	Q9UXC0
Hsap BLAST neighbor:	Q96B26
Species:	Sulfolobus solfataricus

Domains in the same chain:

Download Pymol

e2c38M2	M:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38M1	M:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2

Domains in the same PDB:

e2c38A2	A:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38A1	A:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38B2	B:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38B1	B:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38C2	C:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38C1	C:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38D2	D:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38D1	D:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38E2	E:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38E1	E:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38F2	F:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38F1	F:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38G2	G:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38G1	G:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38H2	H:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38H1	H:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38I2	I:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38I1	I:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38J2	J:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38J1	J:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38K2	K:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38K1	K:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38L2	L:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38L1	L:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38M2	M:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38M1	M:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38N2	N:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38N1	N:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38O2	O:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38O1	O:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38P2	P:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38P1	P:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38Q2	Q:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38Q1	Q:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38R2	R:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38R1	R:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38S2	S:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38S1	S:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38T2	T:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38T1	T:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38U2	U:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38U1	U:192-274	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38V2	V:9-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38V1	V:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38W2	W:1-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38W1	W:192-275	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e2c38X2	X:8-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e2c38X1	X:156-241	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2

Structural contacts of domain e2c38M2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2c38N2	M:X,Y,Z->N:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2c38N1	M:X,Y,Z->N:x,y,z	Ribonuclease PH domain 2	Interaction Interface Pymol
e2c38P2	M:X,Y,Z->P:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2c38X2	M:X,Y,Z->X:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2c38X1	M:X,Y,Z->X:x,y,z	Ribonuclease PH domain 2	Interaction Interface Pymol
e2c38Q2	M:X,Y,Z->Q:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e2c38O2	M:X,Y,Z->O:x,y,z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol