Domain ID e2ck3D2

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: ATP-synt_ab
UID: 000102309
Type: Automatic domain
Parent: e2jdiA3
Range: D:82-357
Ligands: ADP AZI MG
PDB: 2ck3
PDB Description: ATP SYNTHASE SUBUNIT BETA, MITOCHONDRIAL
UniProt: P00829
Hsap BLAST neighbor: P06576
Species: Bos taurus

Structure of domain e2ck3D2

Domains in the same chain:

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e2ck3D1 D:10-81 cradle loop barrel RIFT-related Alanine racemase-C
e2ck3D2 D:82-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2ck3D3 D:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase

Domains in the same PDB:

e2ck3A1 A:24-94 cradle loop barrel RIFT-related Alanine racemase-C
e2ck3A3 A:95-379 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2ck3A2 A:380-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2ck3B1 B:24-94 cradle loop barrel RIFT-related Alanine racemase-C
e2ck3B3 B:95-379 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2ck3B2 B:380-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2ck3C1 C:24-94 cradle loop barrel RIFT-related Alanine racemase-C
e2ck3C3 C:95-379 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2ck3C2 C:380-510 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2ck3D1 D:10-81 cradle loop barrel RIFT-related Alanine racemase-C
e2ck3D2 D:82-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2ck3D3 D:358-475 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2ck3E1 E:10-81 cradle loop barrel RIFT-related Alanine racemase-C
e2ck3E2 E:82-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2ck3E3 E:358-474 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2ck3F1 F:10-81 cradle loop barrel RIFT-related Alanine racemase-C
e2ck3F2 F:82-357 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e2ck3F3 F:358-474 C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase C-terminal domain of alpha and beta subunits of F1 ATP synthase
e2ck3G1 G:1-173,G:206-271 ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit ATP synthase (F1-ATPase), gamma subunit
e2ck3H1 H:17-101 Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N Epsilon subunit of F1F0-ATP synthase-N
e2ck3H2 H:102-140 Long alpha-hairpin Epsilon subunit of F1F0-ATP synthase C-terminal domain Epsilon subunit of F1F0-ATP synthase C-terminal domain

Structural contacts of domain e2ck3D2 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2ck3C2 D:x,y,z->C:X,Y,Z C-terminal domain of alpha and beta subunits of F1 ATP synthase Interaction Interface Pymol
e2ck3C3 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e2ck3A1 D:x,y,z->A:X,Y,Z RIFT-related Interaction Interface Pymol
e2ck3A3 D:x,y,z->A:X,Y,Z P-loop domains-related Interaction Interface Pymol
e2ck3G1 D:X,Y,Z->G:x,y,z ATP synthase (F1-ATPase), gamma subunit Interaction Interface Pymol
e2ck3A1 D:-X+1,Y-1/2,-Z+3/2->A:x,y,z RIFT-related Interaction Interface Pymol
e2ck3E2 D:X,Y-1,Z->E:x,y,z P-loop domains-related Interaction Interface Pymol
e2ck3E1 D:-X+1,Y-1/2,-Z+3/2->E:x,y,z RIFT-related Interaction Interface Pymol