| UID: | 000312436 |
|---|---|
| Type: | Automatic domain |
| Parent: | e2b1xB1 |
| Range: | D:5-174 |
| PDB: | 2ckf |
| PDB Description: | RING-HYDROXYLATING DIOXYGENASE BETA SUBUNIT |
| UniProt: | Q65AT0 |
| Species: | Sphingomonas sp. CHY-1 |
Structure of domain e2ckfD1
Domains in the same chain:
| e2ckfD1 | D:5-174 | Cystatin-like | NTF2-like | NTF2-like |
Domains in the same PDB:
| e2ckfA1 | A:1-78,A:135-152 | ISP domain | ISP domain | ISP domain |
| e2ckfA2 | A:79-134 | Trm112p-like | Trm112p-like | Trm112p-like |
| e2ckfA3 | A:153-452 | TBP-like | Bet v1-like | Bet v1-like |
| e2ckfB1 | B:5-174 | Cystatin-like | NTF2-like | NTF2-like |
| e2ckfC2 | C:1-78,C:135-152 | ISP domain | ISP domain | ISP domain |
| e2ckfC3 | C:79-134 | Trm112p-like | Trm112p-like | Trm112p-like |
| e2ckfC1 | C:153-216,C:238-446 | TBP-like | Bet v1-like | Bet v1-like |
| e2ckfD1 | D:5-174 | Cystatin-like | NTF2-like | NTF2-like |
| e2ckfE2 | E:1-78,E:135-152 | ISP domain | ISP domain | ISP domain |
| e2ckfE3 | E:79-134 | Trm112p-like | Trm112p-like | Trm112p-like |
| e2ckfE1 | E:153-218,E:239-453 | TBP-like | Bet v1-like | Bet v1-like |
| e2ckfF1 | F:5-174 | Cystatin-like | NTF2-like | NTF2-like |
Structural contacts of domain e2ckfD1 of H-group "NTF2-like":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e2ckfC1 | D:x,y,z->C:X,Y,Z | Bet v1-like | Interaction Interface Pymol |
| e2ckfC3 | D:x,y,z->C:X,Y,Z | Trm112p-like | Interaction Interface Pymol |
| e2ckfF1 | D:X,Y,Z->F:x,y,z | NTF2-like | Interaction Interface Pymol |
| e2ckfB1 | D:x,y,z->B:X,Y,Z | NTF2-like | Interaction Interface Pymol |
| e2ckfA3 | D:x,y,z->A:-X+1,Y-1/2,-Z+1/2 | Bet v1-like | Interaction Interface Pymol |
| e2ckfE1 | D:x,y,z->E:X,Y,Z | Bet v1-like | Interaction Interface Pymol |
| e2ckfE3 | D:x,y,z->E:X,Y,Z | Trm112p-like | Interaction Interface Pymol |
| e2ckfB1 | D:x,y,z->B:-X+1,Y-1/2,-Z+1/2 | NTF2-like | Interaction Interface Pymol |
