ECOD: domain e2cybB1

Domain ID e2cybB1

A: a/b three-layered sandwiches
X: HUP domain-like
H: HUP domains
T: HUP domains
F: tRNA-synt_1b

UID:	000290749
Type:	Automatic domain
Parent:	e1j1uA1
Range:	B:1-320
Ligands:	TYR
PDB:	2cyb
PDB Description:	Tyrosyl-tRNA synthetase
UniProt:	O29482
Hsap BLAST neighbor:	P54577
Species:	Archaeoglobus fulgidus

Structural contacts of domain e2cybB1 of H-group "HUP domains":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2cybA1	B:x,y,z->A:X,Y,Z	HUP domains	Interaction Interface Pymol
e2cybB1	B:x,y,z->B:X-1,Y,Z	HUP domains	Interaction Interface Pymol
e2cybB1	B:X-1,Y,Z->B:x,y,z	HUP domains	Interaction Interface Pymol
e2cybA1	B:-X,Y-1/2,-Z+1->A:x,y,z	HUP domains	Interaction Interface Pymol
e2cybA1	B:X,Y,Z-1->A:x,y,z	HUP domains	Interaction Interface Pymol
e2cybB1	B:x,y,z->B:-X,Y-1/2,-Z+1	HUP domains	Interaction Interface Pymol
e2cybB1	B:-X,Y-1/2,-Z+1->B:x,y,z	HUP domains	Interaction Interface Pymol

e2cybA1	A:2-320	HUP domain-like	HUP domains	HUP domains
e2cybB1	B:1-320	HUP domain-like	HUP domains	HUP domains