Domain ID e2d2cO1

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  • A: alpha bundles
  • X: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
  • F: Cytochrom_B_C
UID: 000053587
Type: Automatic domain
Parent: e1ppjC1
Range: O:18-154
Ligands: BCR BNT CLA HEC HEM OPC
PDB: 2d2c
PDB Description: CYTOCHROME B6-F COMPLEX SUBUNIT 4
UniProt: P83792
Hsap BLAST neighbor: P00156
Species: Mastigocladus laminosus

Structure of domain e2d2cO1

Domains in the same chain:

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e2d2cO1 O:18-154 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Domains in the same PDB:

e2d2cA1 A:13-214 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e2d2cB1 B:18-154 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2d2cC1 C:1-169,C:232-250 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e2d2cC3 C:170-231 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2d2cC2 C:251-286 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
e2d2cD2 D:12-45 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e2d2cD1 D:54-105,D:147-179 ISP domain ISP domain ISP domain
e2d2cD3 D:106-146 Trm112p-like Trm112p-like Trm112p-like
e2d2cE1 E:1-32 PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex
e2d2cF2 F:2-36 PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex
e2d2cH1 H:1-27 PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex
e2d2cN1 N:13-214 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e2d2cO1 O:18-154 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e2d2cP1 P:1-169,P:232-250 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e2d2cP3 P:170-231 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e2d2cP2 P:251-286 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
e2d2cQ2 Q:12-45 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e2d2cQ1 Q:54-105,Q:147-179 ISP domain ISP domain ISP domain
e2d2cQ3 Q:106-146 Trm112p-like Trm112p-like Trm112p-like
e2d2cR1 R:1-32 PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex
e2d2cS2 S:2-36 PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex
e2d2cU1 U:1-27 PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex

Structural contacts of domain e2d2cO1 of H-group "a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2d2cN1 O:x,y,z->N:X,Y,Z Transmembrane heme-binding four-helical bundle Interaction Interface Pymol
e2d2cP1 O:X,Y,Z->P:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2d2cP2 O:X,Y,Z->P:x,y,z Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Interaction Interface Pymol
e2d2cC1 O:x,y,z->C:X-Y,X,Z+1/6 Immunoglobulin-related Interaction Interface Pymol
e2d2cD3 O:X,Y,Z->D:x,y,z Trm112p-like Interaction Interface Pymol
e2d2cD1 O:X,Y,Z->D:x,y,z ISP domain Interaction Interface Pymol