Domain ID e2d2iB2

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  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: NAD(P)-binding Rossmann-fold domains
  • F: Gp_dh_N
UID: 000302541
Type: Automatic domain
Parent: e2g82A2
Range: B:1-154,B:318-338
Ligands: NAP SO4
PDB: 2d2i
PDB Description: glyceraldehyde 3-phosphate dehydrogenase
UniProt: Q55245
Hsap BLAST neighbor: P04406
Species: Synechococcus sp.

Structure of domain e2d2iB2

Domains in the same chain:

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e2d2iB2 B:1-154,B:318-338 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2d2iB1 B:155-317 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Domains in the same PDB:

e2d2iA2 A:1-154,A:318-338 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2d2iA1 A:155-317 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e2d2iB2 B:1-154,B:318-338 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2d2iB1 B:155-317 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e2d2iO2 O:1-154,O:318-338 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2d2iO1 O:155-317 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e2d2iP2 P:1-154,P:318-338 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2d2iP1 P:155-317 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e2d2iQ2 Q:1-154,Q:318-338 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2d2iQ1 Q:155-317 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
e2d2iR2 R:1-154,R:318-338 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e2d2iR1 R:155-317 FwdE/GAPDH domain-like Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain

Structural contacts of domain e2d2iB2 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2d2iA1 B:x,y,z->A:-X,Y,-Z Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain Interaction Interface Pymol
e2d2iA2 B:X-1/2,Y-1/2,Z->A:x,y,z Rossmann-related Interaction Interface Pymol
e2d2iB2 B:x,y,z->B:-X,Y,-Z Rossmann-related Interaction Interface Pymol
e2d2iB2 B:-X,Y,-Z->B:x,y,z Rossmann-related Interaction Interface Pymol