Domain ID e2d2oA3

Download files:
  • A: a/b barrels
  • X: TIM beta/alpha-barrel
  • H: TIM barrels
  • T: TIM barrels
  • F: Alpha-amylase
UID: 000094365
Type: Automatic domain
Parent: e1e43A2
Range: A:121-502
Ligands: CA
PDB: 2d2o
PDB Description: Neopullulanase 2
UniProt: Q08751
Hsap BLAST neighbor: Q07837
Species: Thermoactinomyces vulgaris

Structure of domain e2d2oA3

Structural contacts of domain e2d2oA3 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2d2oB3 A:X,Y,Z->B:x,y,z TIM barrels Interaction Interface Pymol
e2d2oB1 A:X,Y,Z->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2d2oB3 A:x,y,z->B:X-1/2,-Y+1/2,-Z+1 TIM barrels Interaction Interface Pymol
e2d2oB2 A:x,y,z->B:X-1/2,-Y+1/2,-Z+1 Glycosyl hydrolase domain Interaction Interface Pymol
e2d2oB1 A:-X+1/2,-Y+1,Z-1/2->B:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2d2oA1 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Immunoglobulin-related Interaction Interface Pymol
e2d2oA2 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Glycosyl hydrolase domain Interaction Interface Pymol
e2d2oB3 A:X-1/2,-Y+1/2,-Z+1->B:x,y,z TIM barrels Interaction Interface Pymol