Domain ID e2dddA1

Download files:
  • A: beta barrels
  • X: GFP-like
  • H: GFP-like
  • T: GFP-like
  • F: GFP
UID: 000296657
Type: Automatic domain
Parent: e1oxdA1
Range: A:1-226
Ligands: MG NA
PDB: 2ddd
PDB Description: PHOTOCONVERTIBLE FLUORESCENT PROTEIN
UniProt: Q53UG8
Species: Favia favus

Structure of domain e2dddA1

Domains in the same chain:

e2dddA1 A:1-226 GFP-like GFP-like GFP-like

Domains in the same PDB:

e2dddA1 A:1-226 GFP-like GFP-like GFP-like
e2dddB1 B:1-227 GFP-like GFP-like GFP-like

Structural contacts of domain e2dddA1 of H-group "GFP-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2dddA1 A:x,y,z->A:-X+1,Y,-Z+1 GFP-like Interaction Interface Pymol
e2dddA1 A:-X+1,Y,-Z+1->A:x,y,z GFP-like Interaction Interface Pymol
e2dddB1 A:X,Y,Z->B:x,y,z GFP-like Interaction Interface Pymol
e2dddB1 A:x,y,z->B:-X+1/2,Y-1/2,-Z+1 GFP-like Interaction Interface Pymol
e2dddB1 A:x,y,z->B:-X+1/2,Y-1/2,-Z GFP-like Interaction Interface Pymol
e2dddB1 A:X-1/2,Y+1/2,Z-1->B:x,y,z GFP-like Interaction Interface Pymol
e2dddB1 A:x,y,z->B:X-1/2,Y-1/2,Z GFP-like Interaction Interface Pymol
e2dddA1 A:x,y,z->A:X,Y,Z-1 GFP-like Interaction Interface Pymol
e2dddA1 A:X,Y,Z-1->A:x,y,z GFP-like Interaction Interface Pymol