ECOD: domain e2dexX2

Domain ID e2dexX2

A: beta sandwiches
X: Immunoglobulin-like beta-sandwich
H: Immunoglobulin-related
T: Common fold of diphtheria toxin/transcription factors/cytochrome f
F: PAD_M

UID:	000001877
Type:	Manual and representative domain
Range:	X:113-293
Ligands:	CA
PDB:	2dex
PDB Description:	Protein-arginine deiminase type IV
UniProt:	Q9UM07
Hsap BLAST neighbor:	Q9UM07
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e2dexX2

Domains in the same chain:

Download Pymol

e2dexX1	X:4-112	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e2dexX2	X:113-293	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e2dexX3	X:294-663	Pentein	Pentein	Pentein

Domains in the same PDB:

e2dexX1	X:4-112	Cupredoxin-like	Cupredoxin-related	Cupredoxin-related
e2dexX2	X:113-293	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Common fold of diphtheria toxin/transcription factors/cytochrome f
e2dexX3	X:294-663	Pentein	Pentein	Pentein

Structural contacts of domain e2dexX2 of H-group "Immunoglobulin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e2dexX3	X:x,y,z->X:-X,Y,-Z	Pentein	Interaction Interface Pymol
e2dexX2	X:x,y,z->X:-X,Y,-Z	Immunoglobulin-related	Interaction Interface Pymol
e2dexX3	X:-X,Y,-Z->X:x,y,z	Pentein	Interaction Interface Pymol
e2dexX2	X:-X,Y,-Z->X:x,y,z	Immunoglobulin-related	Interaction Interface Pymol
e2dexX1	X:-X-1/2,Y-1/2,-Z-1->X:x,y,z	Cupredoxin-related	Interaction Interface Pymol
e2dexX3	X:-X+1/2,Y-1/2,-Z->X:x,y,z	Pentein	Interaction Interface Pymol