Domain ID e2dgmA2

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  • A: a/b three-layered sandwiches
  • X: PLP-dependent transferases
  • H: PLP-dependent transferases
  • T: PLP-dependent transferases
  • F: Pyridoxal_deC
UID: 001151950
Type: Automatic domain
Parent: e1js3A2
Range: A:3-336
Ligands: FMT IOD PLP
PDB: 2dgm
PDB Description: GLUTAMATE DECARBOXYLASE BETA
UniProt: P69910
Hsap BLAST neighbor: O95470
Species: Escherichia coli

Structure of domain e2dgmA2

Domains in the same chain:

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e2dgmA2 A:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2dgmA3 A:337-454 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Domains in the same PDB:

e2dgmA2 A:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2dgmA3 A:337-454 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2dgmB2 B:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2dgmB3 B:337-453 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2dgmC2 C:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2dgmC3 C:337-456 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2dgmD2 D:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2dgmD3 D:337-456 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2dgmE2 E:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2dgmE3 E:337-452 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases
e2dgmF2 F:3-336 PLP-dependent transferases PLP-dependent transferases PLP-dependent transferases
e2dgmF3 F:337-456 C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases C-terminal domain in some PLP-dependent transferases

Structural contacts of domain e2dgmA2 of H-group "PLP-dependent transferases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e2dgmB3 A:X,Y,Z->B:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e2dgmB2 A:X,Y,Z->B:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmF2 A:X,Y,Z->F:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmF3 A:X,Y,Z->F:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e2dgmE2 A:X,Y,Z->E:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmC3 A:X,Y,Z->C:x,y,z C-terminal domain in some PLP-dependent transferases Interaction Interface Pymol
e2dgmC2 A:X,Y,Z->C:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmC2 A:x,y,z->C:X,Y,Z-1 PLP-dependent transferases Interaction Interface Pymol
e2dgmE2 A:X,Y-1,Z->E:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmA2 A:x,y,z->A:X,Y-1,Z PLP-dependent transferases Interaction Interface Pymol
e2dgmA2 A:X,Y-1,Z->A:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmF2 A:X,Y-1,Z->F:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmC2 A:X,Y-1,Z+1->C:x,y,z PLP-dependent transferases Interaction Interface Pymol
e2dgmE2 A:x,y,z->E:X-1,Y+1,Z PLP-dependent transferases Interaction Interface Pymol